I've always figured that while the Jockey's may have created us, we were simply a tool to them, something that they could wipe out at the touch of a button if we got too smart. But somewhere along the line, just like the myth, one if them (Prometheus) wanted to protect us and in the course of time, shared many gifts with us until he got found out. Possibly before they bound him, Prometheus put up a fight hence the reason for the carnage, but whatever is down there on that planet it seems apparent they couldn't control it. I think this Prometheus is who we find on the planet, possibly in the form of a head who can transform himself, abandoned by his people after betraying them, with some creature inside him put there by his people as his punishment, that these humans unknowingly set free after they bring it back to their ship.