In all seriousness, it wouldn't even have to be an *actual* "Alien" story as opposed to character stories.
In my head I simply picture a 3-issue comic book run inspired by the line in Alien 3; "I had a horrible dream in Hypersleep, and I had to be sure how she died"
Issue 1; Starts with a recap of end-fight in Aliens as the backdrop to some comic book monologue about survival, only addition being just prior to that we see something drop from the shadows of the dropship landing gear; a small palm-sized black sticky cluster that hits the floor and burns in (just prior to Bishop noticing the burning by his foot and being impaled).. monologue ends as Queen is blasted out of airlock, and Ripley closes Newts cryotube. Focus on Newts face in hyper sleep revealing she's isn't dreaming, but is reliving a nightmare. *title page* Then rest of issue follows Newt's nightmare (mix of actual and dreamt events, on LV426). Issue ends with a quick shot of the cluster hanging beneath the flooring, bigger than when we saw it at the start, with black resin creeping outwards.
Issue 2; Starts days later from where issue 1 ended, with weeping acid from the growing cluster burning through a cable beneath the floor. CRT monitor in cryo chamber reports malfunction, and all 4 tubes open. As the crew awaken, Newt asking if they are home yet, Hicks delivers the news that there has been a problem, and they are going to have to use the civilian freezers on the lower deck. We get some technobabble about why you can't go back into cryo for at least 48 hours after hyper sleep (health reasons/strain on the body, etc), and we are treated with a montage of Newt, Ripley and Hicks enjoying some family time on the Sulaco, eating together in the mess hall, playing etc. Switch to a shot of Hicks sleeping in bed next to Ripley, Newt on a bunk opposite. Hicks is sweating, and clearly showing signs of distress in his sleep. *title page* then we follow Hick's nightmare (again, real events (ie; Mission on Arcturia with his squad, drinks with the locals/ Vasquez and Drake smirking amongst themselves as Frost leaves with a beautiful Asian girl hanging on his arm etc etc.. that slowly changes into a horrifying nightmare of fictional events with the squad all fighting a xeno infestation) issue ends with Ripley waking Hicks, they all move to the civilian cryotubes to resume their journey home. Cluster in the dark has grown substantially and two of the shapes are now visibly large ovomorphs, with smaller undeveloped ones clustered around them.
Issue 3; same format as above, starts with monologue, one ovomorph opens and two legs can be seen emerging. Cut to Ripley's cryotube; *title page* Then we get Ripley's nightmare; a mismatch of events from 'Alien', but on board Gateway Station, with frequent blurred lines between a young Amanda and Newt..nightmare ends with a facehugger on Newt's face. Final shot is Ripley's cracked cryotube with the silhouette of a facehugger over as she lays breathing heavy but sleeping as the "Emergency escape vehicle launching" sirens ring out.
Origin of the eggs, multiple huggers OR one (depending how you choose to interpret it) Ripley's nightmare fuelled by being half awake and semi-aware of what is going on (reference made to it in Alien 3 whilst taking with Clemens), and cryotube differences explained..without the need for yet another Alien encounter between. Bonus family time for Ripley, Newt and Hicks for the Alien 3 haters.
I'd be happy with that. 😂